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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LIHC rs2049443 chr7:64426173 A/C 3.53E-7 192 2.9 5.22 13.97 KM Plot
LIHC rs2072578 chr3:10322521 T/C 1.84E-5 192 13.72 13.53 0.2 KM Plot
LIHC rs2075352 chr3:10311939 A/G 1.96E-5 192 0.2 13.73 13.58 KM Plot
LIHC rs2075353 chr3:10312507 A/G 1.84E-5 191 13.9 13.35 0.2 KM Plot
LIHC rs2075356 chr3:10328809 T/C 2.03E-5 191 13.6 13.53 0.2 KM Plot
LIHC rs2097701 chr12:112316774 T/G 6.38E-6 192 12.57 14.98 4.03 KM Plot
LIHC rs2102575 chr4:187131504 G/A 7.56E-8 189 3.03 13.63 13.67 KM Plot
LIHC rs2106430 chr22:30597135 C/T 1.62E-9 192 13.17 16.1 0.63 KM Plot
LIHC rs2106722 chr22:30543824 C/T 2.53E-9 192 13.55 12.43 0.63 KM Plot
LIHC rs2141331 chr2:202151492 C/T 0 192 13.35 13.73 0.37 KM Plot
LIHC rs2158030 chr12:112285591 T/C 6.38E-6 192 12.57 14.98 4.03 KM Plot
LIHC rs2163539 chr2:74116536 A/C 0.00018 192 13.67 13.13 2.9 KM Plot
LIHC rs2177660 chr7:64418157 T/C 3.53E-7 192 2.9 5.22 13.97 KM Plot
LIHC rs2185684 chr1:224647741 T/G 9.32E-5 191 13.55 13.83 5.25 KM Plot
LIHC rs2201066 chr4:44660219 G/T 3.37E-6 191 3.4 13.35 16.07 KM Plot